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Table 1 Summary of MHC class II DRB2 variation by population

From: Selection and demography drive range-wide patterns of MHC-DRB variation in mule deer

Population

n

MHC

A

AP

HO

HE

HWE p value

Tajima’s D

Fu’s Fs

Fu and Li’s D*

Fu and Li’s F*

AB-728

24

13

0

0.667

0.837

*

1.25

11.69

1.31

1.54

AB-OR

23

14

0

0.696

0.868

**

1.48

10.38

1.07

1.46

AZ-30

24

10

0

0.750

0.867

ns

1.32

17.42

1.57*

1.76*

AZ-KF

24

11

0

0.750

0.814

ns

1.16

13.65

1.12

1.36

CO-SJ

24

10

0

0.583

0.839

*

1.65

18.13

1.67**

1.99**

CO-ST

24

13

0

0.583

0.859

ns

0.82

10.96

1.11

1.20

KS-BD

24

11

0

0.625

0.859

*

0.67

12.46

2.04**

1.84*

MT-RV

24

16

3

0.708

0.893

**

1.42

6.95

0.96

1.35

ND-SW

24

15

0

0.583

0.832

***

0.61

7.36

1.21

1.18

NV-PC

24

17

0

0.750

0.917

ns

0.91

6.46

1.60*

1.61

SD-CU

24

10

0

0.542

0.824

***

1.06

15.58

0.77

1.05

SK-14

23

11

0

0.435

0.831

***

0.98

12.64

1.76**

1.76*

SO-CS

24

8

0

0.583

0.829

ns

1.66

20.09

1.04

1.51

TX-AL

23

11

2

0.783

0.836

ns

1.42

15.52

1.10

1.45

WY-SH

24

17

0

0.833

0.880

ns

1.06

6.66

1.24

1.40

YK-SE

23

6

0

0.565

0.793

ns

2.24*

26.75

2.00**

2.49**

  1. Populations are listed with their sample sizes (n). Population codes are alphanumeric, with the prefix describing the state or province of collection and the suffix describing the specific sample location. MHC statistics include number of alleles (A), number of private alleles (AP), observed (HO) and expected heterozygosity (HE), deviations from HWE listed as a significance value, and neutrality test values including Tajima’s D, Fu’s Fs, Fu and Li’s D* and F*. Significance values: *p < 0.05; **p < 0.01; ***p < 0.001.
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BMC Ecology and Evolution

ISSN: 2730-7182

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