From: Adaptive evolution of Hox-gene homeodomains after cluster duplications
Model | ℓ | PS-d N | PS-d S | PD-d N | PD-d S | ω0 | ωPCD | Sig. |
---|---|---|---|---|---|---|---|---|
Hox1 | ||||||||
One ratio | -707.88 | 0.0096 | ||||||
Two ratio | -705.14 | 0.0046 | 0.1250 | P < 0.05 | ||||
Hox2 | ||||||||
One ratio | -800.02 | 0.0048 | 0.5967 | 0.0025 | 0.3130 | 0.0080 | ||
Two ratio | -798.08 | 0.0037 | 0.6313 | 0.0090 | 0.6700 | 0.0058 | 0.1334 | 0.05 |
Hox3 | ||||||||
One ratio | -989.99 | 0.0042 | 1.1187 | 0.0003 | 0.0718 | 0.0037 | ||
Two ratio | -984.72 | 0.0034 | 1.3424 | 0.0050 | 0 | 0.0025 | A: (0/0) B: (1.2/0) D: (1/0) | P << 0.01 |
Hox4 | ||||||||
One ratio | -1573.85 | 0.0046 | 0.4348 | 0.0081 | 0.7736 | 0.0105 | ||
Two ratio | -1570.91 | 0.0034 | 0.4518 | 0.0151 | 0.5811 | 0.0076 | 0.0259 | P < 0.05 |
Hox5 | ||||||||
One ratio | -1015.97 | 0.0028 | 0.8522 | 0.0266 | 8.1561 | 0.0033 | ||
Two ratio | -1014.86 | 0.0025 | 0.9172 | 0.0279 | 1.4231 | 0.0027 | 0.0196 | n.s. |
Hox6 | ||||||||
One ratio | -1309.19 | 0.0110 | 0.7089 | 0.0242 | 1.5604 | 0.0155 | ||
Two ratio | -1297.90 | 0.0096 | 0.7323 | 0.0337 | 0.5095 | 0.0131 | A: (0/0) B: (3.5/0) C: (10/0) | P << 0.01 |
Hox7 | ||||||||
One ratio | -701.50 | 0.0032 | 0.8238 | 0 | 0 | 0.0039 | ||
Two ratio | -696.90 | 0.0025 | 1.0950 | 0.0037 | 0 | 0.0023 | (0.5/0) | P << 0.01 |
Hox8 | ||||||||
One ratio | -1092.36 | 0.0055 | 0.3889 | 0.0129 | 0.9167 | 0.0141 | ||
Two ratio | -1089.88 | 0.0041 | 0.4206 | 0.0204 | 0.4981 | 0.0098 | 0.0409 | P < 0.05 |
Hox9 | ||||||||
One ratio | -1389.70 | 0.0042 | 0.8239 | 0.0112 | 2.1879 | 0.0101 | ||
Two ratio | -1377.10 | 0.0004 | 0.6179 | 0.0110 | 0.0950 | 0.0054 | 0.1156 | P << 0.01 |
Hox10 | ||||||||
One ratio | -1790.54 | 0.0118 | 0.3296 | 0.0204 | 0.5690 | 0.0359 | ||
Two ratio | -1783.60 | 0.0124 | 0.5521 | 0.0225 | 0 | 0.0224 | (4.5/0) | P << 0.01 |
Hox11 | ||||||||
One ratio | -1210.27 | 0.0054 | 0.5091 | 0.0132 | 1.2578 | 0.0105 | ||
Two ratio | -1206.53 | 0.0037 | 0.5339 | 0.0244 | 0.8452 | 0.0070 | 0.0288 | P << 0.01 |
Hox12 | ||||||||
One ratio | -1092.80 | 0.0144 | 0.6274 | 0.0545 | 2.3793 | 0.0229 | ||
Two ratio | -1092.72 | 0.0141 | 0.6378 | 0.0563 | 1.8156 | 0.0222 | 0.031 | n.s. |
Hox13 | ||||||||
One ratio | -1745.34 | 0.0171 | 0.7425 | 0.0419 | 1.8193 | 0.0230 | ||
Two ratio | -1745.61 | 0.0160 | 0.7516 | 0.0496 | 0.9426 | 0.0212 | 0.0526 | 0.063 |