FLU, an amino acid substitution model for influenza proteins

Table 8 Pairwise comparisons between FLU and HIVb, HIVw, JTT, LG models.

LogLK/site: the log likelihood difference between trees inferred using M₁ and M₂; a positive (negative) value means M₁ is better (worse) than M₂. #M₁ > M₂: the number of alignments among 992 alignments where M₁ results in better likelihood value than M₂. #M₁ > M₂ (p < 0.05): the number of alignments where the Kishino-Hasegawa test indicates that M₁ is significantly better than M₂. #M₂ > M₁ (p < 0.05): the same as #M₁ > M₂, but now M₂ is significantly better than M₁.

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