Marker | Insert | Array Result | Used in this study? |
---|---|---|---|
45 × 8 | PDR1 | Many missing scores, Cy3/Cy5 false positive problem | No |
45 × 15 | PDR1 | Good | Yes |
45 × 20 | PDR1 | Very weak signals, Cy3/Cy5 false positive problem | No |
45 × 29 | PDR1 | Very weak signals, Cy3/Cy5 false positive problem | No |
45 × 31 | PDR1 | Slight false positive problem | Yes |
45 × 33 | PDR1 | Slight Cy5 false positive problem | Yes |
45 × 38 | PDR1 | Very low polymorphism, Cy5 false positive problem | No |
64 × 11 | PDR1 | Many weak or mixed Cy3/Cy5 scores | No |
64 × 14 | PDR1 | Rather low polymorphism | Yes |
64 × 15 | PDR1 | Many weak or mixed Cy3/Cy5 scores, Cy5 false positive problem | No |
64 × 29 | PDR1 | Very low polymorphism, Cy3 false positive problem | No |
64 × 40 | PDR1 | Many weak or mixed Cy3/Cy5 scores, false positive problem | No |
64 × 45 | PDR1 | Many mixed Cy3/Cy5 scores, Cy5 false positive problem | No |
64 × 74 | PDR1 | Many mixed Cy3/Cy5 scores, false positive problem | No |
64 × 76 | PDR1 | Rather low polymorphism | Yes |
95 × 2 | PDR1 | Slight Cy5 false positive problem | Yes |
95 × 19 | PDR1 | Good | Yes |
95 × 25 | PDR1 | Slight Cy5 false positive problem | Yes |
95 × 43 | PDR1 | Good | Yes |
261 × 1 | PDR1 | No polymorphism | No |
261 × 13 | PDR1 | Cy5 false positive problem, very low polymorphism | No |
281 × 1 | PDR1 | Slight Cy3 false positive problem | Yes |
281 × 5 | PDR1 | Rather low polymorphism | Yes |
281 × 16 | PDR1 | Good | Yes |
281 × 40 | PDR1 | Slight Cy5 false positive problem | Yes |
281 × 44 | PDR1 | Good | Yes |
399-3-6 | PDR1 | Cy3 false positive problem, very low polymorphism | No |
399-14-9 | PDR1 | Good | Yes |
399-80-46 | PDR1 | Slight Cy5 false positive problem | Yes |
399-9x | PDR1 | Slight Cy5 false positive problem | Yes |
399 × 131 | PDR1 | Slight false positive problem | Yes |
399 × 149 | PDR1 | Slight false positive problem | Yes |
1006nr2 | PDR1 | Low polymorphism; Cy3 false positive problem | No |
1006nr9 | PDR1 | Very poor image | No |
1006nr13 | PDR1 | Good | Yes |
1006nr27 | PDR1 | Good | Yes |
1006nr32 | PDR1 | Weak signal; multiple spot colours | No |
1006 × 6 | PDR1 | Slight Cy5 false positive problem | Yes |
1006 × 19 | PDR1 | Low polymorphism; Cy5 false positives problem | No |
1006 × 21 | PDR1 | Slight Cy3 false positive problem | Yes |
1006 × 36 | PDR1 | Many signals weak or absent; Cy5 false positive problem | No |
1006 × 50 | PDR1 | Some Cy5 background signal (Yellow spots) | Yes |
1006 × 58 | PDR1 | Some Cy5 background signal (Yellow spots) | Yes |
1794-1 | PDR1 | Good | Yes |
1794-2 | PDR1 | Good | Yes |
1794 × 7 | PDR1 | Slight Cy3 false positive problem | Yes |
1794 × 9 | PDR1 | Very low polymorphism | No |
1794 × 35 | PDR1 | Many signals absent; Cy5 background signal | No |
2055nr1 | PDR1 | Good | Yes |
2055nr16 | PDR1 | Low polymorphism, good otherwise | Yes |
2055nr23 | PDR1 | Rather low polymorphism, good otherwise | Yes |
2055nr51 | PDR1 | False positive problem, weak signals | No |
2055nr53 | PDR1 | Slight Cy3 background signal | Yes |
2055 × 10 | PDR1 | Many signals weak or absent; Cy5 false positive problem | No |
2055 × 19 | PDR1 | Low polymorphism, weak signals, many mixed Cy3/Cy5 signals | No |
2055 × 28 | PDR1 | Low polymorphism, weak signals, Cy3 false positive problem | No |
2055 × 29 | PDR1 | Many signals weak or absent; Cy5 false positive problem | No |
2055 × 36 | PDR1 | Cy3 false positive problem | No |
2201CycL6 | PDR1 | Rather low polymorphism | Yes |
2385 × 16 | PDR1 | Very low polymorphism, mixed Cy3/Cy5 signals, Cy3 false positive problem | No |
2385 × 23 | PDR1 | Rather low polymorphism | Yes |
2385 × 46 | PDR1 | Very weak signals, Cy5 false positive problem | No |
2385 × 56 | PDR1 | Very weak signals, Cy3/Cy5 false positive problem | No |
2385 × 64 | PDR1 | Rather low polymorphism | Yes |
2539 × 7 | PDR1 | Some Cy5 contaminating signal | Yes |
3150 × 11 | PDR1 | Almost no polymorphism | No |
Birte-B1 | PDR1 | Good | Yes |
Birte-x5 | PDR1 | Very low polymorphism, many very weak signals | No |
Birte-x16 | PDR1 | Good | Yes |
Birte-x28 | PDR1 | Some weak or mixed Cy3/Cy5 scores | Yes |
Birte-x34 | PDR1 | Good | Yes |
MKRBIP2 | PDR1 | Slight Cy5 contamination problem | Yes |
MKRBIP3 | PDR1 | Many missing scores | No |
MKRBIP7 | PDR1 | Good | Yes |
Cycl1074-L12 | Cyclops | Some Cy5 contaminating signal | Yes |
Cycl1074-L29 | Cyclops | Good | Yes |
Cycl711-L12 | Cyclops | Many missing scores, many mixed Cy3/Cy5 scores | No |
UniTpv | Tpv1 | Good | Yes |
DBAP-261 × 1 | Indel | Very Low polymorphism | No |
DBAP-2055nr53 | Indel | Very Low polymorphism | No |