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Table 1 Main structural features of the Mimachlamys varia mitogenome

From: Complex mitogenomic rearrangements within the Pectinidae (Mollusca: Bivalvia)

Gene

Location

Size (bp)

Start codon

Stop codon

Anticodon

Intergenic nucleotides

No. AA

A+T content (%)

trnN

1–69

69

  

GUU

–

 

54

nad1

94–993

900

TTG

TAG

 

24

299

56.1

trnR

992–1055

64

  

UCG

− 2

 

56.2

rrnL

1111–2532

1422

   

55

 

56.6

cox1

2604–4127

1524

ATG

TAG

 

71

507

55

nad4l

4384–4671

288

TTG

TAG

 

256

95

50.3

trnG

4677–4739

63

  

UCC

5

 

60.3

nad6

4774–5271

498

ATT

TAA

 

34

165

54.6

trnF

5414–5483

70

  

AAA

142

 

58.6

atp8

9690–9848

159

ATG

TAG

 

4206

52

55.3

trnL2

9859–9924

66

  

UAA

10

 

50

cob

10,133–11,257

1125

ATG

TAG

 

208

374

56

trnD

11,256–11,321

66

  

GUC

− 2

 

47

cox3

11,401–12,171

771

TTG

TAA

 

79

256

55.5

trnK

12,215–12,283

69

  

UUU

43

 

46.4

trnF

12,288–12,352

65

  

GAA

4

 

49.2

trnQ2

12,359–12,425

67

  

UUG

6

 

52.2

trnQ1

12,429–12,497

69

  

UUG

3

 

44.1

trnE

12,503–12,568

66

  

UUC

5

 

54.5

atp6

12,642–13,313

672

ATG

TAA

 

73

223

56.8

cox2

13,377–14,078

702

ATG

TAG

 

63

233

54.7

nad2

14,084–15,040

957

ATA

TAA

 

41

306

56

trnV

15,051–15,116

66

  

UAC

10

 

50

nad3

15,125–15,472

348

ATT

TAG

 

8

115

54.9

nad4

15,552–16,835

1284

ATG

TAG

 

79

427

54.8

trnH

16,837–16,902

66

  

GUG

1

 

56.9

trnW

16,908–16,977

70

  

CCA

5

 

54.3

trnY

16,981–17,045

65

  

GUA

3

 

49.2

trnT

17,050–17,112

63

  

UGU

4

 

57.1

trnP

17,116–17,183

68

  

UGG

3

 

48.5

trnI

17,186–17,256

71

  

GAU

2

 

57.7

trnL1

17,265–17,333

69

  

UAG

8

 

53.6

trnM2

17,336–17,402

67

  

CAU

2

 

47.8

trnM1

17,411–17,483

73

  

CAU

8

 

41.1

trnC

17,492–17,559

68

  

GCA

8

 

42.6

trnA

17,571–17,638

68

  

UGC

11

 

59.1

rrnS

17,675–18,638

964

   

36

 

52.7

nad5

18,690–20,393

1704

ATT

TAA

 

51

567

55.9