From: Genetic basis of orange spot formation in the guppy (Poecilia reticulata)
Pigmentary function | Gene name | logFC stage2 | logFC stage 3 | FDR |
---|---|---|---|---|
Xanthophore | ||||
Xanthophore development | pax3b | − 0.240074049 | − 1.024506408 | 0.00168639 |
thra (LOC103468293)* | 0.8422285 | 0.984864278 | 0.00010455 | |
Pteridine synthesis | gch2 (LOC103481546)* | 2.596284167 | 1.346388342 | 5.17E−05 |
Carotenoid related | bscl2 (LOC103471440) | 1.760755604 | 0.88253586 | 0.00109993 |
scarb1 | 0.942303034 | 0.368419924 | 0.00675451 | |
Iridophore | ||||
Iridophore development | edn3 (LOC103465492)* | − 1.219667499 | − 1.091538668 | 8.62E−05 |
fhl2a | 1.544710776 | 1.561272758 | 5.95E−06 | |
fhl2l (LOC103457533) | 3.662766117 | 3.20685195 | 7.18E−18 | |
gpnmb* | 2.676380573 | 2.196925532 | 1.11E−17 | |
tfap2a* | 0.390339609 | − 0.532566067 | 0.00150917 | |
tfec | 1.746850047 | 0.941123134 | 8.82E−06 | |
vps18* | 0.380195963 | − 0.392171768 | 0.00976626 | |
Guanine synthesis | pnp4a (LOC103464790) | 3.628065427 | 2.305069974 | 8.31E−10 |