Table 1 TLR genome/transcriptome survey results and classification of TLRs included in the phylogenetic analysis
From: The evolution of the metazoan Toll receptor family and its expression during protostome development
Species | TLRs | V-type/scc | P-type/mcc | NC | References |
|---|---|---|---|---|---|
Cnidaria | |||||
 Nematostella vectensis | 1 | 0 | 1 | 0 | L: [27] |
 Acropora digitifera | 4 | 1 | 3 | 0 | L: [72] |
 Acropora millepora | 1 | 0 | 1 | 0 | L: [72] |
 Orbicella faveolata | 1 | 0 | 1 | 0 | L: [83] |
Xenacoelomorpha | |||||
 Xenoturbella profunda | 0 | 0 | 0 | 0 | G: Unpublished |
 Hofstenia miamia | 0 | 0 | 0 | 0 | G: GCA004352715 |
 Praesagittifera naikaiensis | 0 | 0 | 0 | 0 | G: PRJDB7329 |
 Isodiametra pulchra | 0 | 0 | 0 | 0 | G: Unpublished |
 Meara stichopi | 0 | 0 | 0 | 0 | G: Unpublished |
 Convolutriloba macropyga | 0 | 0 | 0 | 0 | T: [100] |
Spiralia | |||||
 Bryozoa | |||||
  Membranipora membranacea | 6 | 4 | 1 | 1 | T: SRX1121923 |
  Bugula neritina | 0 | 0 | 0 | 0 | T: [101] |
 Cycliophora | |||||
  Symbion pandora | 0 | 0 | 0 | 0 | T: [102] |
 Annelida | |||||
  Galathowenia oculata | 39 | 18 | 12 | 9 | T: Unpublished |
  Eisenia fetida | 11 | 0 | 1 | 10 | T: SRX3108745 |
  Helobdella robusta | 4 | 1 | 3 | 0 | G: [103] |
  Phyllochaetopterus prolifica | 3 | 1 | 0 | 2 | L: [66] |
 Mollusca | |||||
  Crassostrea gigas | 12 | 10 | 2 | 0 | G: [104] |
  Octopus bimaculoides | 9 | 1 | 6 | 2 | G: [105] |
  Cyclina sinensis | 2 | 1 | 1 | 0 | L: [88] |
  Leptochiton rugatus | 1 | 0 | 0 | 1 | L: [66] |
  Biomphalaria glabrata | 27 | 16 | 10 | 1 | G: [87]/NCBI |
 Brachiopoda | |||||
  Terebratalia transversa | 15 | 4 | 4 | 7 | T: [100] |
  Hemithris psittacea | 6 | 3 | 1 | 2 | T: [66] |
  Lingula anatina | 25 | 15 | 7 | 3 | G: [106] |
 Micrognathozoa | |||||
  Limnogathia maerski | 0 | 0 | 0 | 0 | T: SRX1121929 |
 Gastrotricha | |||||
  Lepidodermella squamata | 0 | 0 | 0 | 0 | T: [107] |
  Macrodasys sp | 0 | 0 | 0 | 0 | T: [108] |
  Megadasys sp | 0 | 0 | 0 | 0 | T: [108] |
  Diuronotus aspetos | 0 | 0 | 0 | 0 | T: SRX1121926 |
  Mesodasys laticaudatus | 0 | 0 | 0 | 0 | T: SRX872416 |
 Nemertea | |||||
  Lineus longissimus | 10 | 7 | 2 | 1 | T: [100] |
  Lineus ruber | 6 | 2 | 3 | 1 | T: Unpublished |
  Notospermus geniculatus | 7 | 5 | 1 | 1 | G: [89] |
  Paranemertes peregrina | 2 | 1 | 0 | 1 | L: [66] |
 Phoronida | |||||
  Phoronopsis harmeri | 2 | 0 | 1 | 1 | T: SRX1121914 |
  Phoronis australis | 24 | 14 | 8 | 2 | G: [89] |
  Phoronis psammophila | 3 | 1 | 1 | 1 | L: [66] |
  Phoronis vancouverensis | 6 | 5 | 0 | 1 | L: [66] |
 Platyhelminthes | |||||
  Macrostomum lignano | 0 | 0 | 0 | 0 | G: [109] |
  Echinococcus multilocularis | 0 | 0 | 0 | 0 | G: [110] |
  Hymenolepis microstoma | 0 | 0 | 0 | 0 | G: [110] |
 Rotifera | |||||
  Epiphanes senta | 1 | 1 | 0 | 0 | T: Unpublished |
  Rotaria tardigrada | 0 | 0 | 0 | 0 | T: [111] |
  Echinorhynchus gadi | 0 | 0 | 0 | 0 | T: SRX1121912 |
  Macracanthorhynchus hirudinaceus | 0 | 0 | 0 | 0 | T: [108] |
Ecdysozoa | |||||
 Priapulida | |||||
  Priapulus caudatus | 3 | 0 | 3 | 0 | T: [100] |
  Halicryptus spinulosus | 4 | 1 | 3 | 0 | T: [100] |
 Tardigrada | |||||
  Hypsibius exemplaris | 1 | 0 | 1 | 0 | G: [112] |
  Ramazzottius varieornatus | 1 | 0 | 1 | 0 | G: [113] |
 Onychophora | |||||
  Peripatopsis capensis | 1 | 0 | 0 | 1 | T: [114] |
 Nematoda | |||||
  Loa loa | 1 | 0 | 1 | 0 | G: [115] |
  Onchocerca volvulus | 1 | 0 | 1 | 0 | G: [116] |
  Caenorhabditis elegans | 1 | 0 | 1 | 0 | L: NCBI |
 Loricifera | |||||
  Armorloricus elegans | 2 | 1 | 1 | 0 | T: SRX1120677 |
 Arthropoda | |||||
  Daphnia pulex | 5 | 2 | 3 | 0 | G: [117] |
  Drosophila melanogaster | 9 | 1 | 8 | 0 | L: NCBI |
  Ixodes scapularis | 5 | 1 | 3 | 1 | L: [118] |
Deuterostomia | |||||
 Tunicata | |||||
  Ciona intestinalis | 2 | 1 | 1 | 0 | L: [97] |
  Oikopleura dioica | 1 | 1 | 0 | 0 | L: [96] |
 Echinodermata | |||||
  Strongylocentrotus purpuratus | 8 | 7 | 1 | 0 | L: [64] |
 Craniata | |||||
  Homo sapiens | 10 | 10 | 0 | 0 | L: NCBI |