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Table 2 Enriched TFBS from attention intensive regions of DeepHBV with HBV integration sites + TCGA Pan Cancer peaks

From: DeepHBV: a deep learning model to predict hepatitis B virus (HBV) integration sites

HOMER known results

HOMER de novo results

Rank

Name

P-value

Rank

Best match/details

P-value

1

BMAL1

1E−323

1

TEAD3

1E−2283

2

NPAS

1.00E−259

2

EBF1

1E−1926

3

CLOCK

1.00E−165

3

TCF7

1E−958

4

c−Myc

1.00E−126

4

GRHL2

1E−504

5

ZFX

1.00E−108

5

Dux

1E−477

6

Tgif2

1.00E−75

6

Ptf1a

1E−465

7

MNT

1.00E−71

7

TEAD

1E−385

8

LRF

1.00E−62

8

Ahr::Arnt

1.00E−302

9

Tbx5

1.00E−62

9

Sox5

1.00E−245

10

ZNF711

1.00E−57

10

TEAD

1.00E−233

11

n-Myc

1.00E−54

11

Zic2

1.00E−204

12

ZNF416

1.00E−52

12

Nr2e3

1.00E−197

13

USF1

1.00E−47

13

SOX18

1.00E−182

14

bHLHE40

1.00E−45

14

ZBTB14

1.00E−174

15

Rbpj1

1.00E−36

15

USF2

1.00E−153

16

Zac1

1.00E−35

16

Isl1

1.00E−142

17

Tgif1

1.00E−32

17

ZNF264

1.00E−142

18

ZEB1

1.00E−30

18

Ascl2

1.00E−133

19

THRb

1.00E−29

19

ZNF460

1.00E−120

20

Ptf1a

1.00E−29

20

LRF

1.00E−117

21

bHLHE41

1.00E−29

21

ZNF416

1.00E−117

22

TEAD1

1.00E−27

22

PKNOX1

1.00E−103

23

Stat3

1.00E−24

23

Bcl6b

1.00E−91

24

Meis1

1.00E−21

24

Arnt

1.00E−90

25

c-Myc

1.00E−21

25

Osr2

1.00E−88

26

Usf2

1.00E−20

26

TFAP2A

1.00E−79

27

NPAS2

1.00E−17

   

28

HIC1

1.00E−17

   

29

TEAD

1.00E−17

   

30

TEAD4

1.00E−16

   

31

AR-halfsite

1.00E−16

   

32

STAT6

1.00E−15

   

33

TCF4

1.00E−13

   

34

MITF

1.00E−13

   

35

TEAD3

1.00E−13

   

36

Atf1

1.00E−12

   

37

HIF-1b

1.00E−11

   

38

Foxo3

1.00E−10

   

39

E2A

1.00E−09

   

40

TEAD2

1.00E−09

   

41

Mef2a

1.00E−08

   

42

ZNF692

1.00E−07

   

43

Nkx3.1

1.00E−07

   

44

COUP-TFII

1.00E−07

   

45

MyoG

1.00E−07

   

46

Nkx2.5

1.00E−06

   

47

Snail1

1.00E−05

   

48

HEB

1.00E−05

   

49

Tbx6

1.00E−05

   

50

SCRT1

1.00E−04

   

51

Nr5a2

1.00E−04

   

52

Nanog

1.00E−03

   

53

Oct11

1.00E−03

   

54

Elk1

1.00E−03

   

55

Erra

1.00E−03

   

56

Gata6

1.00E−03

   

57

BHLHA15

1.00E−03

   

58

AMYB

1.00E−03

   

59

Nr5a2

1.00E−03

   

60

NFkB-p65-Rel

1.00E−02

   

61

Zic

1.00E−02

   

62

TRPS1

1.00E−02

   

63

Hoxa9

1.00E−02

   

64

HIF2a

1.00E−02

   

65

Isl1

1.00E−02

   

66

CEBP:AP1

1.00E−02

   

67

EWS:FLI1-fusion

1.00E−02

   

68

FOXK1

1.00E−02

   

69

ETS

1.00E−02

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