Skip to main content

Table 2 15 new primer pairs developed in the present study. The other 26 tested primers developed by [27] can be found in the additional file section, Additional file 1: Table S1

From: Molecular genetic diversity and differentiation of Nile tilapia (Oreochromis niloticus, L. 1758) in East African natural and stocked populations

Locus

F: Primer sequence (5′-3′)

R: Primer sequence (5′-3′)

Repeat motif

Asr

Ti39

TACCTGCCAGTCATGTGCTG

TGCTCAGACTGGTCCCTTCT

(ATGG)8

368–420

Ti41

TCGCAGCTGCTCCTGTTTAA

TTGTGCACGTGGACATGTTG

(AAAC)11

381–471

Ti43

ATTGCCATCACCAGGAACCA

TGCTAGCCCAGAGCATTTGA

(GAATA)6

425–478

Ti44

TGCTCCTGACTCAGCATCAC

GCAGCACTCTGACATGAAGC

(GAAAA)6

419–469

Ti49

TCGAAGTAGCGTGGAAAACCT

ACAACAACAACAGGTCGGGA

(TGT)8

395–403

Ti50

CCTGTGACAGACTGGTGACC

ACACTGATGCGGTTTACGGT

(ATGG)7

442–517

Ti51

TGCTAAACGCCAGCTGATGA

TTACCACACGATGTCGCAGG

(TGT)8

401–428

Ti52

GAGAAACGTCCAGTGGCAGA

TTTCGATCTGCTGCCCCTTT

(TAT)8

373–429

Ti54

TTTCTTGCCAGCAAAAACAGT

CAGATTCTTCCAGTGCTTGTGC

(GGAT)7

390–480

Ti55

GAGCCCAGACAGCAGACAAT

AGGACCTTCTATGGCCCTGT

(TCTA)7

417–491

Ti56

TGCAGTGAATTTGGCACCTG

AGCCTGAGATACCTGTGCCT

(TGTT)6

310–462

Ti57

CAGTGGGAGGAAGCTCCAAA

GCTGCATGGATCCAATAGGC

(TCCA)7

400–444

Ti59

ATGGACTTAAGCTGCACCCC

TGAGCATTTGACCCCAGCAT

(AGGA)6

429–461

Ti60

GAGCCGCCATAGTGTCACTT

CCTGCTCTCACTCAAAGAGGG

(ATCC)7

473–516

Ti61

GCTACACAGGAAAGCAGAGC

ACTCAATGCTGGACGTGACC

(TGGA)6

474–501

  1. F Forward and R Reverse, Asr Allelic size range.