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Table 1 List of the species used in the study and information of their genome assemblies

From: Is there any intron sliding in mammals?

Organism name

Common name

Assembly id

Assembly date

UCSC annotation databasea

Annotation date

Homo sapiens

Human

hg38

Dec 2013

knownGene

Oct 2019

Pan troglodytes

Chimpanzee

panTro5

May 2016

ensGene

Feb 2019

Macaca mulatta

Rhesus macaque

rheMac8

Nov 2015

ensGene

Feb 2019

Macaca fascicularis

Crab-eating macaque

macFas5

Jun 2013

ensGene

Feb 2019

Papio anubis

Olive baboon

papAnu4

Apr 2017

ensGene

Jun 2019

Chlorocebus sabaeus

Green monkey

chlSab2

Mar 2014

ensGene

Feb 2019

Callithrix jacchus

Common marmoset

calJac3

Mar 2009

ensGene

Nov 2016

Mus musculus

Mouse

mm10

Dec 2011

knownGene [ref]

Oct 2019

Rattus norvegicus

Rat

rn6

Jul 2014

ensGene

Feb 2019

Heterocephalus glaber

Naked mole-rat

hetGla2

Jan 2012

ensGene

Feb 2019

Canis lupus familiaris

Dog

canFam3

Sep 2011

ensGene

Feb 2019

Felis catus

Cat

felCat8

Nov 2014

ensGene

Aug 2018

Bos taurus

Cow

bosTau9

Apr. 2018

RefGene

Jun 2019

Ovis aries

Sheep

oviAri4

Nov 2015

RefGene

Oct 2018

Sus scrofa

Pig

susScr11

Feb 2017

ensGene

Feb 2019

Monodelphis domestica

Gray short-tailed opossum

monDom5

Oct 2006

ensGene

Feb 2019

  1. a refGene consists of RefSeq gene models in the UCSC, ensGene is a dataset of Ensembl gene predictions, and knownGene contains protein coding genes based on proteins from UniProtKB and their corresponding mRNAs from GenBank