Model code | lnL | Parameters | Number of positive selection sites |
---|---|---|---|
M0 (one ratio) | −19,249.376879 | ω = 0.25797 | None |
M1a (nearly neutral) | −18,586.64149 | P0 = 0.70173,P1 = 0.29827 ω0 = 0.07200, ω1 = 1 | Not allowed |
M2a (positive selection) | −18,561.41171 | P0 = 0.69472,P1 = 0.27126,P2 = 0.03402 ω0 = 0.07356,ω1 = 1,ω2 = 2.61739 | 13 |
M3 (discrete) | −11,953.59808 | P0 = 0.28795,P1 = 0.18745,P2 = 0.27619 ω0 = 0.03433,ω1 = 0.03433,ω2 = 0.03433 | Not allowed |
M7 (beta) | −18,532.88959 | p = 0.24865,q = 0.61421(p1 = 0.1), ω = 0.00101 | Not allowed |
M8 (beta&ω > 1) | −18,489.18864 | p0 = 0.9112692,p = 0.33179,q = 1.27694, (p1 = 0.08874) ω = 1.77811 | 56 |