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Table 1 Genetic diversity of each population of Populus pruinosa and P. euphratica

From: Phylogeographic patterns of the desert poplar in Northwest China shaped by both geology and climatic oscillations

 

Nuclear Microsatellites

Chloroplast sequence

Code

N s

MLGs

R

A

H O

H E

F IS

N c

N h

Hap_div

P. pruinosa

122

54

0.438

152

0.484

0.560

0.112 *

58

8

0.730

MYp

15

8

0.500

67

0.493

0.590

0.175

9

3

0.667

BCp

14

2

0.077

35

0.441

0.480

0.118

4

2

0.500

Alp

16

8

0.467

68

0.477

0.520

0.089

12

3

0.530

GMp

40

33

0.821

135

0.539

0.595

0.094

26

5

0.668

YLp

17

3

0.125

46

0.471

0.549

0.172

7

2

0.476

P. euphratica

551

203

0.368

207

0.538

0.558

0.046

225

20

0.705

MYe

16

8

0.467

77

0.596

0.563

−0.062

10

1

0.000

BCe

14

8

0.538

79

0.581

0.588

0.013

11

4

0.691

Ale

17

8

0.438

72

0.412

0.541

0.251a

9

3

0.417

MF

16

10

0.600

74

0.505

0.539

0.065

11

3

0.473

PSh

16

3

0.133

49

0.569

0.541

−0.064

9

2

0.556

QM

18

1

0.000

24

–

–

–

2

1

0.000

YPH

20

9

0.421

73

0.473

0.504

0.065

9

2

0.222

RQ

16

10

0.600

70

0.444

0.512

0.140

11

1

0.000

ShY

17

10

0.588

99

0.547

0.585

0.068

10

2

0.200

KEL

14

12

0.846

65

0.477

0.492

0.032

10

3

0.378

WL

25

13

0.500

75

0.511

0.511

0.000

6

1

0.000

LT

7

1

0.000

26

 

–

–

1

1

–

YLe

13

6

0.417

69

0.549

0.579

0.057

7

4

0.810

ChJ

16

10

0.600

76

0.527

0.576

0.088

11

4

0.491

KLM

21

4

0.150

62

0.559

0.599

0.077

5

3

0.800

MGCa

15

2

0.071

51

0.549

0.612

0.125

4

2

0.500

MGCb

17

1

0.000

BEJa

20

11

0.526

84

0.512

0.553

0.077

11

4

0.600

BEJb

20

7

0.316

58

0.626

0.575

−0.096

2

2

1.000

HBH

16

4

0.200

52

0.618

0.545

−0.161

4

2

0.500

BLK

3

1

0.000

70

0.588

0.593

0.099

   

BLST

5

1

0.000

12

4

0.652

BLBQ

9

4

0.735

   

QHX

3

1

0.000

25

–

–

–

3

1

0.000

MLX

20

1

0.000

24

–

–

–

12

1

0.000

YWX

24

15

0.625

96

0.539

0.582

0.099

12

4

0.803

TLH1

16

1

0.000

41

0.559

0.598

0.095

8

4

0.750

TLH2

35

1

0.000

AKS

11

5

0.400

54

0.612

0.527

−0.185

5

2

0.400

JQ

23

1

0.000

23

–

–

–

2

1

0.000

DH

28

1

0.000

24

–

–

–

7

1

0.000

JT

20

19

0.947

83

0.489

0.509

0.040

7

3

0.762

EQN

20

14

0.684

94

0.538

0.584

0.082

14

4

0.648

Total

673

257

–

228

–

–

–

268

25

–

  1. Number of samples genotyped (Ns), number of multilocus genotypes (MLGs) identified, clonal diversity (R) and total number of alleles on the entire sample (A), expected heterozygosity (He) and deviation from Hardy–Weinberg equilibrium (FIS, asignificant after a 1000 permutation test) with the 17 nuclear microsatellites. Number of samples sequenced (Nc), number of haplotypes (Nc) and haplotype diversity (Hap_div) with the chloroplast trnK sequences