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Table 1 Summary of the level of genetic diversity in six and 13 geographic populations of C. hangiongensis and C. koreanus in South Korea at both mtDNA control region and seven microsatellite loci

From: Contrasting life histories contribute to divergent patterns of genetic diversity and population connectivity in freshwater sculpin fishes

 

Population

MtDNA

Microsatellites

N

N H

HR

PH

h

Ï€

N

N A

AR

PA

H E

H O

F IS

H-W tests (P)

C. hangiongensis

SCH

82

7

3.434

4

0.417

0.001

51

16.57

13.41

7

0.800

0.769

0.040

**

YYH

42

3

1.588

0

0.257

0.001

31

15.29

13.80

3

0.796

0.751

0.058

NS

UJ

41

4

1.935

0

0.474

0.001

31

13.29

11.83

2

0.690

0.687

0.004

NS

GN

34

3

2.602

0

0.355

0.001

35

14.43

12.62

6

0.772

0.763

0.011

NS

MC

25

3

2.000

0

0.353

0.001

26

15.00

14.49

5

0.799

0.802

−0.004

NS

OK

1

1

–

0

–

–

–

–

–

–

–

–

–

–

Total

225

8

–

4

0.379

0.001

174

22.43

14.31

23

0.788

0.755

–

**

C. koreanus

PC 1

25

6

4.881

4

0.770

0.015

26

8.29

7.69

9

0.726

0.696

0.042

**

PC 2

25

5

3.710

4

0.710

0.003

26

11.14

10.42

10

0.811

0.835

−0.033

NS

WJ 1

9

1

–

0

–

–

9

2.86

–

1

–

–

–

–

WJ 2

25

1

0.000

0

0.000

0.000

25

5.14

4.89

0

0.523

0.543

−0.039

NS

CA

23

1

0.000

1

0.000

0.000

24

3.29

3.25

0

0.492

0.511

−0.039

NS

JS

24

4

2.787

4

0.605

0.003

25

9.57

9.13

9

0.766

0.717

0.060

**

SC

34

3

1.941

3

0.399

0.002

20

2.71

2.71

4

0.289

0.307

−0.065

NS

YY

19

1

0.000

1

0.000

0.000

20

2.14

2.14

3

0.223

0.286

−0.291

NS

GS

7

1

–

1

–

–

8

5.57

–

22

–

–

–

–

YG

2

1

–

1

–

–

2

1.71

–

2

–

–

–

–

IJ

23

1

0.000

1

0.000

0.000

23

2.00

1.95

2

0.197

0.250

−0.280

**

GP

27

1

0.000

0

0.000

0.000

27

3.86

3.77

3

0.575

0.683

−0.192

**

GG

30

1

0.000

0

0.000

0.000

25

4.57

4.27

9

0.514

0.486

0.056

**

Total

273

24

–

20

0.905

0.019

260

25.86

13.02

74

0.896

0.546

–

**

  1. N sample sizes, NH number of haplotypes, HR haplotype richness, PH number of private haplotypes, h haplotype diversity, π nucleotide diversity, NA: observed mean number of alleles across seven loci, AR allelic richness, PA number of private alleles, HE expected heterozygosity, HO observed heterozygosity, FIS inbreeding coefficient, and H-W tests (P): P values for multi-locus tests for Hardy Weinberg equilibrium (HWE). **: P < 0.01 after a Bonferroni correction applied, NS: not significant
  2. Four populations (C. hangiongensis: OK, C. koreanus: WJ 1, GS and YG) with insufficient sample sizes (N < 10) were excluded from some of the genetic diversity statistics. Population abbreviations as in text and Additional file 1: Table S1