From: Pan-genome and phylogeny of Bacillus cereus sensu lato
Analysis | Matrix | Partitioning scheme | Unique alignment | Best tree | Bootstrap | Nodes with | Nodes with | Nodes with |
---|---|---|---|---|---|---|---|---|
patterns | searches | replicates | B P=1.0 | B P≥0.5 | B P<0.5 | |||
ml_1 | mat_1 | all_nuc | 46,395 | 1000 | 100 | 68 | 98 | 14 |
ml_2 | mat_2 | all_nuc | 46,174 | 1000 | 100 | 68 | 93 | 19 |
ml_3 | mat_3 | all_nuc | 44,750 | 1000 | 200 | 63 | 94 | 18 |
ml_4 | mat_3 | codon_pos | 49,889 | 1000 | 200 | 64 | 92 | 20 |
ml_5 | mat_4 | all_nuc | 11,729 | 1000 | 200 | 53 | 86 | 26 |
ml_6 | mat_5 | all_nuc | 691,147 | 10 | 100 | 92 | 112 | 0 |
ml_7 | mat_5 | codon_pos | 852,707 | 28 | 100 | 89 | 112 | 0 |
ml_8 | mat_6 | all_nuc | 3,948,459 | 1 | 0 | n/a | n/a | n/a |
mp_1 | mat_3 | all_nuc | 83,3832 | n/a | n/a | n/a | n/a | n/a |