From: Detecting consistent patterns of directional adaptation using differential selection codon models
 | M1 | M2 | ||
---|---|---|---|---|
Threshold | Mean number of FP | FPR | Mean number of FP | FPR |
Condition 1 (within-patients) | ||||
 >0.55 | 1843.7 | 20.8 | 1845.8 | 20.8 |
 >0.60 | 1112.7 | 12.6 | 1166.8 | 13.2 |
 >0.65 | 684.9 | 7.7 | 737.8 | 8.3 |
 >0.70 | 316.9 | 3.6 | 334.5 | 3.8 |
 >0.75 | 173.1 | 2.0 | 181.8 | 2.1 |
 >0.80 | 81.8 | 0.9 | 86.5 | 1.0 |
 >0.85 | 26.0 | 0.3 | 31.7 | 0.4 |
 >0.90 | 7.1 | 0.1 | 4.6 | 0.1 |
 >0.95 | 0.75 | 0.01 | 0.1 | 0.0 |
Condition 2 (HLA-B57+) | ||||
 >0.55 | 1004.1 | 11.3 | 957 | 10.8 |
 >0.60 | 456.3 | 5.15 | 471 | 5.3 |
 >0.65 | 229 | 2.58 | 237.1 | 2.7 |
 >0.70 | 88.9 | 1 | 78.7 | 0.9 |
 >0.75 | 31.3 | 0.3 | 27.3 | 0.3 |
 >0.80 | 12.9 | 0.15 | 8.4 | 0.1 |
 >0.85 | 3.8 | 0.04 | 1.6 | 0.02 |
 >0.90 | 0.4 | 0 | 0.05 | 0 |
 >0.95 | 0 | 0 | 0 | 0 |
Condition 3 (HLA-B35+) | ||||
 >0.55 | 1245.1 | 14 | 1226.5 | 13.8 |
 >0.60 | 632.4 | 7.1 | 683 | 7.7 |
 >0.65 | 345.6 | 3.9 | 385.3 | 4.3 |
 >0.70 | 141.4 | 1.6 | 148.1 | 1.7 |
 >0.75 | 58.6 | 0.7 | 64.4 | 0.73 |
 >0.80 | 25.3 | 0.3 | 23.1 | 0.3 |
 >0.85 | 7.7 | 0.1 | 6.5 | 0.07 |
 >0.90 | 1.2 | 0.01 | 0.9 | 0.01 |
 >0.95 | 0 | 0 | 0 | 0 |