Revealing hidden species diversity in closely related species using nuclear SNPs, SSRs and DNA sequences – a case study in the tree genus Milicia

Table 3 Estimates of genetic distances and niche overlap measure (D) between Milicia genetic clusters. The degree of genetic differentiation was based on F _ST, Nei’s D _S and Goldtstein’s δμ ² computed from genotypes at SNP and SSR datasets

Genetic clusters		SSRs			SNPs		Niche overlap (D)
X	Y	δμ ²	F _st	D _s	F _st	D _s	Niche overlap (D)
K1	K2	2.726	0.185	0.486	0.759	0.632	0.180
K1	K3	3.030	0.250	0.491	0.569	0.608	0.292
K1	K4	4.328	0.270	0.531	0.677	0.655	0.303
K1	K5	3.892	0.343	1.122	0.782	0.398	0.479
K1	K6	10.795	0.301	1.030	0.568	0.091	0.046
K2	K3	2.231	0.237	0.370	0.220	0.130	0.129
K2	K4	2.876	0.245	0.356	0.286	0.150	0.078
K2	K5	7.193	0.440	1.081	0.756	1.043	0.060
K2	K6	14.100	0.455	1.647	0.700	0.624	0.114
K3	K4	0.351	0.052	0.049	0.051	0.024	0.475
K3	K5	4.758	0.381	0.641	0.522	0.543	0.280
K3	K6	8.026	0.409	0.924	0.533	0.570	0.200
K4	K5	6.587	0.411	0.619	0.616	0.599	0.237
K4	K6	9.800	0.431	0.882	0.622	0.631	0.068
K5	K6	8.624	0.577	1.324	0.740	0.340	0.070
Global pairwise genetic distance		-	0.333	0.771	0.560	0.469	-

ISSN: 2730-7182