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Table 1 Gene features in the three new panpulmonate mitogenomes

From: Positive selection on panpulmonate mitogenomes provide new clues on adaptations to terrestrial life

 

Ellobioidea

Stylommatophora

 

Coding

Carychium tridentatum

Arion rufus

Helicella itala

Gene

strand

  

Start

Stop

  

Start

Stop

  

Start

Stop

  

From

To

codon

codon

From

To

codon

codon

From

To

codon

codon

cox1

+

1

1536

TTG

TAA

1

1530

TTG

TAA

1

1530

ATG

TAA

trnV

+

1529

1591

-

-

1538

1600

-

-

1527

1587

-

-

rrnL

+

1679

2645

-

 

1690

2578

-

-

1699

2583

-

-

trnL1

+

2588

2653

-

-

2592

2654

-

-

2595

2655

-

-

trnP

+

2712

2773

-

-

2657

2721

-

-

2656

2712

-

-

trnA

+

2650

2712

-

-

2739

2803

-

-

2714

2775

-

-

nad6

+

2778

3233

ATT

TAA

2838

3278

ATA

TAG

2776

3249

TTG

TAA

nad5

+

3258

4889

ATT

TAG

3238

4920

ATA

TAA

3239

4915

TTG

TAA

nad1

+

4867

5775

TTG

TAA

4911

5813

ATG

TAG

4867

5796

ATT

TAA

nad4l

+

5776

6114

GTG

TAA

5822

6124

ATA

TAG

5787

6098

ATT

TAG

cob

+

6056

7177

ATT

TAG

6103

7182

TTG

TAA

6113

7187

TTG

T

trnD

+

7175

7224

-

-

7184

7248

-

-

7188

7242

-

-

trnC

+

7228

7290

-

-

7284

7342

-

-

7243

7303

-

-

trnF

+

7291

7354

-

-

7346

7409

-

-

7307

7368

-

-

cox2

+

7340

8053

TTG

TAA

7412

8080

ATG

TAG

7369

8067

GTG

TAG

trnY

+

8028

8079

-

-

8207

8270

-

-

8042

8101

-

-

trnW

+

8080

8140

-

-

8082

8149

-

-

8097

8157

-

-

trnG

+

8150

8197

-

-

8465

8527

-

-

8158

8218

-

-

trnH

+

8199

8260

-

-

8522

8591

-

-

8215

8274

-

-

trnQ

-

8292

8354

-

-

8672

8736

-

-

8275

8332

-

-

trnL2

-

8355

8419

-

-

9557

9624

-

-

8333

8388

-

-

atp8

-

8394

8570

TTG

TAG

9578

9775

ATG

TAG

8360

8614

ATG

TAA

trnN

-

8571

8637

-

-

9781

9843

-

-

8615

8677

-

-

atp6

-

8638

9282

ATG

TAA

9836

10489

TTG

TAA

8679

9332

ATA

TAA

trnR

-

9283

9343

-

-

10490

10555

-

-

9330

9389

-

-

trnE

-

9344

9408

-

-

8589

8655

-

-

9390

9449

-

-

rrnS

-

9408

10086

-

-

8822

9477

-

-

9449

10126

-

-

trnM

+

10108

10176

-

-

9491

9553

-

-

10145

10210

-

-

nad3

-

10172

10528

ATA

TAA

10557

10904

ATA

TAA

10188

10556

ATG

TAA

trnS2

-

10540

10595

-

-

10914

10979

-

-

10554

10605

-

-

trnS1

+

10598

10653

-

-

10993

11053

-

-

10683

10734

-

-

nad4

+

10653

11960

TTG

TAA

11041

12444

ATT

TAA

10723

12036

ATC

TAG

trnT

-

11983

12047

-

-

12391

12455

-

-

12040

12101

-

-

cox3

-

12038

12826

ATG

TAG

12436

13233

ATT

TAA

12082

12882

ATA

TAA

trnI

+

12871

12933

-

-

13280

13342

-

-

12921

12980

-

-

nad2

+

12933

13871

ATT

TAG

13307

14230

TTG

TAA

12969

13913

ATT

TAG

trnK

+

13860

2

-

-

14262

8

-

-

13914

7

-

-

  1. Annotations were performed in the MITOS server using default parameters, and then manually refined in Geneious R7. +/− signs indicate the sense of each annotation. Gene rearrangements with respect to the other two mitogenomes are indicated in bold