Table 1 Specimens used in this study and accession numbers of resultant sequences
Species | Subfamily (Family) | Voucher | Accession numbers | |||||||
|---|---|---|---|---|---|---|---|---|---|---|
Microhylidae | Â | Â | rag1 | rag2 | tyr | bdnf | cox1 | cxcr4 | ncx1 | 16S |
Barygenys flavigularis | Asterophryinae | IABHU 6597 | AB611856 | AB611857 | AB611858 | AB611859 | AB611860 | AY948800[33] | AY948845[33] | AY948767[33] |
Calluella guttulata | Microhylinae | No voucher (pettrade) | AB611861 | AB611862 | AB611863 | AB611864 | EF396041[3] | EF017975[2] | EF018031[2] | DQ283144[1] |
Chaperina fusca | Microhylinae | BORN 8478 | AB611865 | AB611866 | AB611867 | AB611868 | AB611869 | AB611870 | AB611871 | AB611872 |
Cophixalus cryptotympanum | Asterophryinae | IABHU 6602 | AB611873 | AB611874 | AB611875 | AB611876 | AB611877 | AB611878 | AB611879 | AB611880 |
Ctenophryne geayi | Gastrophryninae | No voucher (pettrade) | AB611881 | AB611882 | AB611883 | AB611884 | AB611885 | AB611886 | AB611887 | AB611888 |
Dyscophus guineti | Dyscophinae | No voucher (pettrade) | AB611889 | AB611890 | AB611891 | AB611892 | AB611893 | AB611894 | AB611895 | DQ283434[1] |
Gastrophryne olivacea | Gastrophryninae | KUHE 33224 | AB611896 | AB611897 | AB611898 | AB611899 | AB611900 | EF017968[2] | EF018005[2] | DQ347338[34] |
Gastrophrynoides immaculatus | Unknown | UKM HC 279 | AB611901 | AB611902 | AB611903 | AB611904 | AB611905 | AB611906 | AB611907 | AB611908 |
Kalophrynus interlineatus | Kalophryninae | No voucher (pettrade) | AB611909 | AB611910 | AB611911 | AB611912 | AB611913 | AB611914 | AB611915 | AB611916 |
Kalophrynus pleurostigma | Kalophryninae | No voucher (pettrade) | AB611917 | AB611918 | AB611919 | AB611920 | AB611921 | AY948776[33] | AY948811[33] | DQ283146[1] |
Kaloula taprobanica | Microhylinae | KUHE 37252 | AB611922 | AB611923 | AB611924 | AB611925 | AB611926 | AY948772[33] | AY948807[33] | AF249057[35] |
Metaphrynella pollicaris | Microhylinae | KUZ 21655 | AB611927 | AB611928 | AB611929 | AB611930 | AB611931 | AB611932 | AB611933 | AB611934 |
Metaphrynella sundana | Microhylinae | BORN 8191 | AB611935 | AB611936 | AB611937 | AB611938 | AB611939 | EF017973[2] | EF018029[2] | EF017954[2] |
Microhyla annectens | Microhylinae | KUHE 52438 | AB611940 | AB611941 | AB611942 | AB611943 | AB611944 | AB611945 | AB611946 | AB611947 |
Microhyla marmorata | Microhylinae | KUHE 32455 | AB611948 | AB611949 | AB611950 | AB611951 | AB611952 | AB611953 | AB611954 | AB611955 |
Microhyla okinavensis | Microhylinae | IABHU living individual | AB611956 | AB611957 | AB611958 | AB611959 | AB303950[36] | AB611960 | AB611961 | AB303950[36] |
Micryletta inornata | Microhylinae | KUHE 35133 | AB611962 | AB611963 | AB611964 | EF396022[3] | AB611965 | AB611966 | AB611967 | AB611968 |
Phrynella pulchra | Unknown | UKM HC 820 | AB611969 | AB611970 | AB611971 | AB611972 | AB611973 | AB611974 | AB611975 | AB611976 |
Phrynomantis microps | Phrynomerinae | No voucher (pettrade) | AB611977 | AB611978 | AB611979 | AB611980 | AB611981 | AB611982 | AB611983 | AB611984 |
Plethodontohyla inguinalis | Cophylinae | UADBA AK041208-001 | AB611985 | AB611986 | AB611987 | AB611988 | AB611989 | AB611990 | AB611991 | AB611992 |
Ramanella montana | Microhylinae | Not preserved | AB611993 | AB611994 | AB611995 | AB611996 | AB611997 | AB611998 | AB611999 | AB612000 |
Scaphiophryne madagascariensis | Scaphiophryninae | No voucher (pettrade) | AB612001 | AB612002 | AB612003 | AB612004 | AB612005 | AB612006 | AB612007 | AB612008 |
Afrobatrachia | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
Arthroleptis variabilis | (Arthroleptidae) | ZFMK 68794 | EF396073[3] | EF396112[3] | AY341756[37] | AB612009 | AB612010 | AY364180[38] | AB612011 | AB612012 |
Hemisus marmoratus | (Hemisotidae) | No voucher (pettrade) | AB612013 | EF396127[3] | EF395975[3] | AB612014 | AB612015 | AY364186[38] | AY948827[33] | AB612016 |
Hyperolius viridiflavus | (Hyperoliidae) | No voucher (pettrade) | AY323769[39] | AY323789[39] | AB612017 | EF396013[3] | AB612018 | AB612019 | AB612020 | AB612021 |
Trichobatrachus robustus | (Arthroleptidae) | No voucher (pettrade) | EF396109[3] | AB612022 | AY844192[40] | EF396035[3] | AB612023 | AB612024 | AB612025 | AB612026 |
Natatanura | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
Blommersia wittei | (Mantellidae) | ZSM (D48/2000) | AY323774[39] | AY323795[39] | AY341751[37] | AY323774[39] | AB612027 | AB612028 | AB612029 | AB612030 |
Buergeria buergeri | (Rhacophoridae) | IABHU living individual | AB612031 | AB612032 | AB612033 | AB612034 | AB127977[41] | AB612035 | AB612036 | AB127977[41] |
Lithobates catesbeianus | (Ranidae) | IABHU living individual | AB612037 | AB612038 | AB612039 | AB612040 | AB511303[42] | AB612041 | AB612042 | X12841[43] |
Mantella madagascariensis | (Mantellidae) | IABHU 6933 | AB612043 | AB612044 | AB612045 | AB612046 | AB212225[44] | AB612047 | AB612048 | AB212225[44] |
Staurois latopalmatus | (Ranidae) | BORN 8098 | AB612049 | AB612050 | AB612051 | AB612052 | AB511311[42] | EF017987[2] | EF018011[2] | AB511310[42] |
Hyloides | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
Agalychnis callidryas | (Hylidae) | No voucher (pettrade) | AY323765[39] | AY323780[39] | DQ283018[1] | AY323765[39] | AB612053 | AB612054 | AB612055 | AB612056 |
Bufo japonicus | (Bufonidae) | IABHU 4001 | AB612057 | AB612058 | AB612059 | AB612060 | AB303363[36] | AB612061 | AB612062 | AB303363[36] |
Archaeobatrachia | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
Megophrys nasuta | (Megophryidae) | No voucher (pettrade) | AB612063 | AB612064 | AB612065 | AB612066 | AB612067 | AB612068 | AB612069 | AB612070 |
Scaphiopus holbrookii | (Scaphiopodidae) | No voucher (pettrade) | AB612071 | AB612072 | AB612073 | AB612074 | AB612075 | AB612076 | AB612077 | AB612078 |